Here is a good article on Deep Sand Beds (DSB) and why to use them. Many in the club prefer Bare Bottom (BB) because DSB's can get pockets on hydrogen sulfide. Personally I like the looks of a sand bed much better, not to say that JJ's tank is not currently the best looking tank I have seen in the state. But many will argue that DSB's are much better for the inhabitants, like Dr. Shimek in this article.
http://reefkeeping.com/issues/2003-06/rs/feature/index.phpI would also highly reccomend the articles by Randy Holmes-Farley if you have not read them - Starting with this one:
http://reefkeeping.com/issues/2004-05/rhf/index.phpReefkeeping Magazine is a GREAT resource!